Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948806.1_cds_XP_016489976.1_80442
CDS Infomation

[gene=LOC107809797] [db_xref=GeneID:107809797] [protein=probable choline kinase 1] [protein_id=XP_016489976.1] [location=join(20104..20445,21212..21333,21415..21610,22024..22141,22304..22351,22886..22986,23096..23281)] [gbkey=CDS]
Sequence

ATGGCGGTGAAGACTAATGAAAGTATTCTGCCAGAGGAATTGATGAAATTGCTTCTAAAT
TTAGCTACAAAATGGGGGGATGTATTGGATCTAAAGACGTTGAAAGTTCACCATTTGAGT
GGTGCCCTGACTAATGAGGTTTATCGGATAAGTTGGCCTACTAATAACAACGAAAATGTG
TCGAGGAAAGTCTTGGTTCGCATGTATGGTGAAGGAGTAGAGCGTTTCTTCAATAGGGAT
GAGGAGATTAGAACTTTTGAGTGCTTGTCAAAGAAAGGTCAAGGACCTAAACTTCTTGGT
CAGTTTCCAAATGGTAGAGTTGAGGAGTTCATTCATTCAAGGACACTATCTGCTGATGAT
CTTCGTGACTCGGAGATCTCTGCTTCGGTAGCTGCTAAACTGAGGGAGTTTCATAACCTT
GACATGCCTGGTTTAAAGAATGTCCTTCTCTGGGATCGTCTCAGAAACTGGCTAAATGAG
GCAAAGGGACTGTGCTCCCCTGAACATATGAAGGAGTTCTCCTTAGGTAATCTTGAAAAG
GAAATCAACTTATTGGAAAAGGAAGTGTCAACAGAGTCTCAAGAGATTGCCTTTTGCCAC
AATGATATGCAGTATGGTAATATAATGATTGACGAAAAAACGAGGGCCATTACTATCATC
GACTACGAGTATGCTGGTTACAATCCAATTGCTTATGACTTTGCAAACCACTTCTGCGAA
ATGACAGCAAATTATCATACTGATACCCCTCATATCATGCACTTCAATACGTACCCTGAT
ATAGAGGAGCGACATCGGTTTATTCGTGCATATCTCAGCTCTTCAGGCCATCAACCAAGT
GATGAGAAAGTAAAGAAGCTCGCTGATGAAGCAGAGAAGTATACCCTTGCAAATCACTTG
TTCTGGGGATTGTGGGGAGTCATCTCGGCATATGTTAACAGTATCGAGTTTGATTACATG
GAGTACGCAAGGGGAAGATTCGAGCAGTATTGGTTGAGAAAGCCCGAACTCTTGGGTGCC
ACAGACAACTTGCCTCATGTAAACGGTTCAGCTGAAGCAAAAACAGATTCTCCACTATTG
ATTGATGTCAAAACATGTACATTAACAATGTAG

Peptide Sequence

PEP ID

XP_016489976.1
PEP Infomation

PREDICTED: probable choline kinase 1 [Nicotiana tabacum]
Sequence

MAVKTNESILPEELMKLLLNLATKWGDVLDLKTLKVHHLSGALTNEVYRISWPTNNNENV
SRKVLVRMYGEGVERFFNRDEEIRTFECLSKKGQGPKLLGQFPNGRVEEFIHSRTLSADD
LRDSEISASVAAKLREFHNLDMPGLKNVLLWDRLRNWLNEAKGLCSPEHMKEFSLGNLEK
EINLLEKEVSTESQEIAFCHNDMQYGNIMIDEKTRAITIIDYEYAGYNPIAYDFANHFCE
MTANYHTDTPHIMHFNTYPDIEERHRFIRAYLSSSGHQPSDEKVKKLADEAEKYTLANHL
FWGLWGVISAYVNSIEFDYMEYARGRFEQYWLRKPELLGATDNLPHVNGSAEAKTDSPLL
IDVKTCTLTM

Transcript Sequence

Gene sequence data has not been registered.